Added support for run benchmarks scripts

#!/bin/bash

#SBATCH --job-name=mpi-grid     # job name (default is the name of this file)

#SBATCH --output=log.%x.job_%j  # file name for stdout/stderr (%x will be replaced with the job name, %j with the jobid)

#SBATCH --partition=gpXY        # partition/queue name for the job submission

#SBATCH --nodes=4               # number of nodes

#SBATCH --ntasks-per-node=2     # MPI processes per node

#SBATCH --threads-per-core=1    # do not use hyperthreads (i.e. CPUs = physical cores below)

#SBATCH --cpus-per-task=2       # number of CPUs per process

#SBATCH --gpus-per-task=0       # number of GPUs per process

#SBATCH --gpu-bind=single:1     # bind each process to its own GPU (single:<tasks_per_gpu>)

# how much RAM per node can be allocated for the job (default: 2G, max: 60G)

#SBATCH --mem=10G

# start the job in the directory it was submitted from

cd "$SLURM_SUBMIT_DIR"

# Stop on error

set -e

USAGE="Usage: ./script <bin> <instances_dir> <result_csv>"

if [ $# -ne 3 ]; then

    echo $USAGE

    exit 1

fi

BIN="$1"

INSTANCES_DIR="$2"

RESULT_CSV="$3"

run_benchmark() {

    local instance="$1"

    srun $BIN "$INSTANCES_DIR/$instance" >> $RESULT_CSV

}

echo "REFINES;INSIDE;OUTSIDE;SEQ;AVG;BEST;WORST" > $RESULT_CSV

for instance in $(ls -A1 $INSTANCES_DIR | sort -t '-' -k5n ); do

    run_benchmark "$instance"

done

 No newline at end of file

#!/bin/bash

#SBATCH --job-name=seq-grid     # job name (default is the name of this file)

#SBATCH --output=log.%x.job_%j  # file name for stdout/stderr (%x will be replaced with the job name, %j with the jobid)

#SBATCH --partition=gpXY        # partition/queue name for the job submission

#SBATCH --ntasks=1              # number of tasks/processes

# how much RAM per node can be allocated for the job (default: 2G, max: 60G)

#SBATCH --mem=10G

# start the job in the directory it was submitted from

cd "$SLURM_SUBMIT_DIR"

# Stop on error

set -e