Updated script for running the SpMV benchmark

#!/usr/bin/env bash

# exit whenever a command fails

set -e

# enable recursive globbing

shopt -s globstar

DEBUG="no"

STOP_TIME="1"

export CUDA_PROFILE=0

PWD=`pwd`

IWD="$PWD"

BASE="ftp://math.nist.gov/pub/MatrixMarket2/Harwell-Boeing/"

BENCHMARK="tnl-benchmark-spmv --with-legacy-matrices yes --precision double --openmp-enabled no"

BENCHMARK_DBG="tnl-benchmark-spmv-dbg --with-legacy-matrices no"

export CUDA_PROFILE_CONFIG="$IWD/cuda-profiler.conf"

PROCESS_CUDA_PROFILE="$IWD/process-cuda-profile.pl"

source matrix-market

#MM_MATRICES=""

source florida-matrix-market

#FLORIDA_MM_MATRICES=""

matrices_base_path="./mtx_matrices"

log_file="./log-files/sparse-matrix-benchmark.log"

for link in $MM_MATRICES;

do

   echo "======================================================================================================"

   matrix=matrices`echo $link | sed 's/ftp:\/\/math.nist.gov\/pub//'`

   unzipped_matrix=`echo $matrix | sed 's/.gz//'`

   if test ! -e $matrix;

   then

      echo "Matrix $matrix is missing !!! Run the script 'get-matrices' first."

   else

      gunzip -c ${matrix} > ${unzipped_matrix}

      echo "Benchmarking with the matrix $unzipped_matrix ..."

      export CUDA_PROFILE_LOG=$unzipped_matrix.float.log

      if test x$DEBUG = xyes;

      then

         gdb --args ${BENCHMARK_DBG} --input-file $unzipped_matrix --log-file log-files/sparse-matrix-benchmark.log --verbose 1

      else

         $BENCHMARK --input-file $unzipped_matrix --log-file log-files/sparse-matrix-benchmark.log --verbose 1

if [[ ! -d "$matrices_base_path" ]]; then

   echo "The path '$matrices_base_path' does not exist." >&2

   exit 1

fi

if [[ ! -d "$(dirname "$log_file")" ]]; then

   mkdir -p "$(dirname "$log_file")"

fi

done

for link in $FLORIDA_MM_MATRICES;

do

   matrix=matrices`echo $link | sed 's/http:\/\/www.cise.ufl.edu\/research\/sparse//'`

   if test ! -e $matrix;

   then

      echo "Matrix $matrix is missing !!! Run the script 'get-matrices' first."

   else

     DIRNAME=`dirname $matrix`

     FILENAME=`basename $matrix`

     cd $DIRNAME

     tar zxvf $FILENAME

     cd $IWD

     if [ ! -d "log-files" ];

	 then

	     mkdir log-files

if [[ -f "$log_file" ]]; then

   echo "WARNING: deleting an existing log file $log_file"

   rm -f "$log_file"

fi

     SUBDIRNAME=`echo $FILENAME | sed 's/.tar.gz//'`

     rm -f $DIRNAME/$SUBDIRNAME/*_b.mtx # these are usualy in array format

     for file in $DIRNAME/$SUBDIRNAME/*.mtx;

     do

         echo "======================================================================================================"

         mtx_file_name=`basename $file`

         mtx_file_name=${mtx_file_name%.mtx}

         if test x$DEBUG = xyes;

         then

            gdb --args ${BENCHMARK_DBG} --input-file $file --log-file log-files/sparse-matrix-benchmark.log --output-mode append --verbose 1

for matrix in "$matrices_base_path"/**/*.mtx; do

   if [[ "$DEBUG" == "yes" ]]; then

      gdb --args $BENCHMARK_DBG --input-file "$matrix" --log-file "$log_file" --output-mode append --verbose 1

   else

            $BENCHMARK --input-file $file --log-file log-files/sparse-matrix-benchmark.log --output-mode append --verbose 1

      $BENCHMARK --input-file "$matrix" --log-file "$log_file" --output-mode append --verbose 1

   fi

done

   fi

done

$BENCHMARK --log-file log-files/sparse-matrix-benchmark.log --output-mode close --verbose 1