Fixing missing superentities of vertices.

src/mesh/initializer/tnlMeshEntityInitializer.h

src/mesh/initializer/tnlMeshSuperentityStorageInitializer.h

src/mesh/layers/tnlMeshStorageLayer.h

src/mesh/layers/tnlMeshSubentityStorageLayer.h

src/mesh/layers/tnlMeshSuperentityAccess.h

src/mesh/tnlMesh.h

src/mesh/tnlMesh_impl.h

src/mesh/traits/tnlMeshSuperentityTraits.h

src/networks/tnlEllpackNetworkPorts.h

src/networks/tnlEllpackNetworkPorts_impl.h

tools/src/tnl-mesh-convert.h