Implemented fix for case when roundToMultiple would give a number smaller than the number of rows, thus causing index to be out of bounds on CUDA. Debugging prints included

Implemented fix for case when roundToMultiple would give a number smaller than the number of rows, thus causing index to be out of bounds on CUDA

Implemented fix for case when roundToMultiple would give a number smaller than the number of rows, thus causing index to be out of bounds on CUDA

Added output-mode to append the log file, not overwite it. Removed parameter verbose for Matrix Reader.

Commented out checking for head and tail of warpList, as they don't contain values, they're just marks to the end of the list.

Preliminary templating of WarpInfo and WarpList. Preliminary fix of mistake where WarpList would loop infinitely. Added checkpoints. Committing for backup purposes.

Added verbose option for MatrixReader to be true by default. Added provisional log-file folder creation. Commiting for backup purposes.

Added verbose options for MatrixReader. Changed order of meta data columns. Commented out adding error messages and added related FIXME.