VTK formats, distributed mesh and synchronizer (!65) · Merge requests · TNL / tnl-dev

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Merged Jakub Klinkovský requested to merge JK/VTK into develop 4 years ago

Jul 30, 2020
- Generalized DistributedMeshSynchronizer to allow synchronization of plain... · 3ccb6528
  Jakub Klinkovský authored 4 years ago
  
  Generalized DistributedMeshSynchronizer to allow synchronization of plain arrays with multiple values per element
  3ccb6528
- Fixed distributeSubentities · 34e9dac0
  Jakub Klinkovský authored 4 years ago
  
  34e9dac0
- Refactoring DistributedMeshSynchronizer: make getEntityOwner public · 81eaf23e
  Jakub Klinkovský authored 4 years ago
  
  81eaf23e
- Generalized DistributedMeshSynchronizer::synchronizeSparse - row capacities... · 59b54f15
  Jakub Klinkovský authored 4 years ago
  
  Generalized DistributedMeshSynchronizer::synchronizeSparse - row capacities have to be exchanged in general
  59b54f15
- Changed default type for LocalIndex to short int · 26a2fd6f
  Jakub Klinkovský authored 4 years ago
  
  26a2fd6f
- Added function distributeSubentities and tests for DistributedMeshSynchronizer on faces · 2a13c0dc
  Jakub Klinkovský authored 4 years ago
  
  Closes #73.
  2a13c0dc
- Added wrapper method reorderEntities to DistributedMesh · 3c662842
  Jakub Klinkovský authored 4 years ago
  
  3c662842
- Refactoring entity tags layer: added getEntityTagsView, removed... · 84d33d3d
  Jakub Klinkovský authored 4 years ago
  
  Refactoring entity tags layer: added getEntityTagsView, removed resetEntityTags, optimized Mesh::reorderEntities
  84d33d3d
- Refactoring DistributedMeshSynchronizer: removed localentitiesCount · ff94f4a9
  Jakub Klinkovský authored 4 years ago
  
  ff94f4a9
- Refactoring distributed mesh and grid synchronizers: using DistributedMesh as... · d6bd51b7
  Jakub Klinkovský authored 4 years ago
  
  Refactoring distributed mesh and grid synchronizers: using DistributedMesh as the primary template parameter
  d6bd51b7
- Implemented GlobalIndexStorage for the remaining entities · c9759520
  Jakub Klinkovský authored 4 years ago
  
  c9759520
- Cleanup: removed getDistributedMesh() from Mesh · 698766e0
  Jakub Klinkovský authored 4 years ago
  
  698766e0
- Added iteration methods to Mesh: forAll, forBoundary, forInterior, forLocal, forGhost · b633d0d1
  Jakub Klinkovský authored 4 years ago
  
  b633d0d1
- Simplified tests for mesh traversers · 53bd736d
  Jakub Klinkovský authored 4 years ago
  
  53bd736d
- Improved logging methods writeProlog and printInfo in Mesh and DistributedMesh · e6dc0832
  Jakub Klinkovský authored 4 years ago
  
  e6dc0832
- Mesh::print works with CUDA meshes too · 24de3988
  Jakub Klinkovský authored 4 years ago
  
  24de3988
- Cleanup: removed multimaps classes as they were superseded with sparse binary matrices · 2e8dfa1e
  Jakub Klinkovský authored 4 years ago
  
  2e8dfa1e
- Improved parsing of CLI arguments in tnl-grid-to-mesh · fe5e1351
  Jakub Klinkovský authored 4 years ago
  
  fe5e1351
- Added tnl-game-of-life · b740ae77
  Jakub Klinkovský authored 4 years ago
  
  b740ae77
- Fixed ordering of points in tnl-decompose-mesh · d10273a5
  Jakub Klinkovský authored 4 years ago
  
  d10273a5
- Small fixes in unit tests · 7325ec0a
  Jakub Klinkovský authored 4 years ago
  
  7325ec0a
- Added tests for DistributedMesh and DistributedMeshSynchronizer · b4c848d7
  Jakub Klinkovský authored 4 years ago
  
  b4c848d7
- Optimized geometry functions - avoiding double-precision constants · 5a51c574
  Jakub Klinkovský authored 4 years ago
  
  5a51c574
- Replaced multimaps in Mesh with segments-based binary matrices · 99cf6c69
  Jakub Klinkovský authored 4 years ago
  
  99cf6c69
- Added support for manual override of the automatically detected mesh file format · fae134f6
  Jakub Klinkovský authored 4 years ago
  
  fae134f6
- PVTUReader: use std::experimental::filesystem library · cd1e5102
  Jakub Klinkovský authored 4 years ago
  
  cd1e5102
- Refactored PVTUWriter from tnl-decompose-mesh into its own class · 90280727
  Jakub Klinkovský authored 4 years ago
  
  90280727
- First working version of DistributedMesh and DistributedMeshSynchronizer · a98f773f
  Jakub Klinkovský authored 5 years ago
  
  a98f773f
- Refactored general functionality from VTUReader into XMLVTK base class and added PVTUReader · 273ce6d6
  Jakub Klinkovský authored 5 years ago
  
  273ce6d6
- Refactoring mesh readers: created base class MeshReader · 597022eb
  Jakub Klinkovský authored 5 years ago
  
  TNLReader does not fit, but it will be probably removed anyway...
  597022eb
- Optimized data reuse in mesh readers · 43733a7b
  Jakub Klinkovský authored 5 years ago
  
  43733a7b
- Added more type aliases for matching in MeshTypeResolver and GridTypeResolver · c3d90b91
  Jakub Klinkovský authored 4 years ago
  
  c3d90b91
- Refactoring mesh type resolver using generic lambdas instead of variadic templates · 39dc72b9
  Jakub Klinkovský authored 5 years ago
  
  39dc72b9
- Removed VTKReader_libvtk.h and MeshReaderTest.h · 70756067
  Jakub Klinkovský authored 5 years ago
  
  70756067
- Mesh: renamed GlobalIndexVector to GlobalIndexArray · b724b16c
  Jakub Klinkovský authored 5 years ago
  
  b724b16c
- Refactoring: generalized BoundaryTags to EntityTags · ebe8ba38
  Jakub Klinkovský authored 5 years ago
  
  ebe8ba38
- Optimized the initialization of mesh links from subentities to superentities · 8708b2e0
  Jakub Klinkovský authored 5 years ago
  
  8708b2e0
- Added mesh layer for the dual graph storage · 56652119
  Jakub Klinkovský authored 5 years ago
  
  56652119
- Added new tool: tnl-decompose-mesh · a45cc411
  Jakub Klinkovský authored 5 years ago
  
  a45cc411
- Renamed MeshLayers directory to 'layers' · 0f4f0f39
  Jakub Klinkovský authored 5 years ago
  
  0f4f0f39
- Moved Mesh_impl.h, MeshEntity_impl.h and Traverser_impl.h from MeshDetails to... · aaec039c
  Jakub Klinkovský authored 5 years ago
  
  Moved Mesh_impl.h, MeshEntity_impl.h and Traverser_impl.h from MeshDetails to Meshes and changed suffix to .hpp
  aaec039c
- Optimized mesh initializer for cases with disabled entity orientations · 01852cf2
  Jakub Klinkovský authored 5 years ago
  
  01852cf2
- Added minimal mesh config to tnl-mesh-converter and fixed related bug in mesh entity initializer · bd748683
  Jakub Klinkovský authored 5 years ago
  
  bd748683
- Fixed Python bindings for Mesh · 57100b46
  Jakub Klinkovský authored 5 years ago
  
  57100b46
- Refactoring mesh configuration: removed entityStorage · 98e54256
  Jakub Klinkovský authored 5 years ago
  
  Consequently, we always store the numbers of all entities, even those that don't have any subentity or superentity mappings enabled.
  98e54256
- Cleaned up DummyMesh · a266aaf4
  Jakub Klinkovský authored 5 years ago
  
  a266aaf4
- Refactoring mesh traits: removed Seed, SeedArrayType and StorageArrayType · 2b037e77
  Jakub Klinkovský authored 5 years ago
  
  2b037e77
- Cleaning up mesh initializer · 56b2bbb3
  Jakub Klinkovský authored 5 years ago
  
  56b2bbb3
- Optimized getTriangleArea for 3D · 49e7bb6a
  Jakub Klinkovský authored 5 years ago
  
  49e7bb6a
- Optimized getTriangleArea using vector expressions · 2734b3b6
  Jakub Klinkovský authored 5 years ago
  
  2734b3b6
- Optimized access to points in getEntityCenter and getEntityMeasure · f4102b4f
  Jakub Klinkovský authored 5 years ago
  
  f4102b4f
- Optimized default BuildConfigTags for meshes · 0e1d0482
  Jakub Klinkovský authored 5 years ago
  
  0e1d0482
- Removed method getIdType from mesh readers · eeeffb99
  Jakub Klinkovský authored 5 years ago
  
  eeeffb99
- Big mesh refactoring · 1575f02f
  Jakub Klinkovský authored 5 years ago
  
  Main changes: - mesh pointer added to MeshEntity, all topology accessors redirected through it to the mesh - storage of points and subentity orientations moved from MeshEntity to Mesh - removed MeshEntityIndex - MeshEntity always stores its index as the GlobalIndexType - removed entity storage from Mesh - mesh entities can be generated on the fly Plus some minor related simplifications, mainly in the mesh initializer.
  1575f02f
- Added VTUReader.h · 5ba08aff
  Jakub Klinkovský authored 5 years ago
  
  5ba08aff
- MeshTypeResolver: enabled matching of more typedefs · e65073ad
  Jakub Klinkovský authored 5 years ago
  
  e65073ad
- Added VTU format to MeshFunction::write, VectorField::write and tnl-view · d6328b9f
  Jakub Klinkovský authored 5 years ago
  
  d6328b9f
- Changed default formats for VTKWriter and VTUWriter to binary and compressed,... · f8199238
  Jakub Klinkovský authored 5 years ago
  
  Changed default formats for VTKWriter and VTUWriter to binary and compressed, compressed falls back to binary if zlib is not available
  f8199238
- Implemented binary and zlib-compressed data formats for VTUWriter · 32d1c833
  Jakub Klinkovský authored 5 years ago
  
  32d1c833
- Refactoring PointData and CellData sections in VTK writers · 800a8b65
  Jakub Klinkovský authored 5 years ago
  
  800a8b65
- Added writeMetadata to VTKWriter · b65b6429
  Jakub Klinkovský authored 5 years ago
  
  b65b6429
- Fixed VTUWriter::writeMetadata - it has to be called before writeEntities · 18143ecb
  Jakub Klinkovský authored 5 years ago
  
  18143ecb
- Added VTUWriter (for now ASCII format only) · 14bb4359
  Jakub Klinkovský authored 5 years ago
  
  14bb4359
- Refactoring: removed tuple types from tnl-view · 8f492406
  Jakub Klinkovský authored 5 years ago
  
  8f492406
- Refactoring: removed writeAllEntities from VTKWriter · 7bb0d691
  Jakub Klinkovský authored 5 years ago
  
  The method was unused (and does not make much sense for the format anyway).
  7bb0d691
- Refactoring: Meshes/Readers/EntityShape.h moved to Meshes/VTKTraits.h · 22213811
  Jakub Klinkovský authored 5 years ago
  
  22213811
- Refactoring namespace TNL::Meshes::Writers::__impl · 52d44ee0
  Jakub Klinkovský authored 5 years ago
  
  52d44ee0
- Removed dummy DistributedMesh from tnl-mesh-converter · 9248a370
  Jakub Klinkovský authored 5 years ago
  
  9248a370
- Fixed typo in tnl-mesh-converter · 748aa4b7
  Jakub Klinkovský authored 5 years ago
  
  748aa4b7
- Refactoring VTKWriter · f6fb8bd3
  Jakub Klinkovský authored 5 years ago
  
  f6fb8bd3
- Refactoring VTKWriter to support the binary format · a234eefe
  Jakub Klinkovský authored 5 years ago
  
  Fixes #6
  a234eefe
- Grids: added public getters for numberOfNxFaces and numberOfNxAndNyFaces · 271ca348
  Jakub Klinkovský authored 5 years ago
  
  271ca348
- Added getOutwardNormalVector.h · 604ad172
  Jakub Klinkovský authored 5 years ago
  
  604ad172

VTK formats, distributed mesh and synchronizer

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